There’s something undeniably magical about the combination of spiced apple cider and luscious caramel, especially when they come together in a soft, pillowy whoopie pie cookie. These Apple Cider Whoopie Pie Cookies with Caramel are the perfect treat for crisp autumn afternoons, cozy gatherings, or any time you crave a sweet, comforting bite. With a tender cookie infused with warm spices and a creamy caramel filling, this recipe is sure to become a seasonal favorite that you’ll want to bake again and again.
Why Apple Cider Whoopie Pie Cookies with Caramel is Worth Your Time

If you’ve ever wondered how to capture the soul of fall in a single dessert, look no further. Apple Cider Whoopie Pie Cookies with Caramel offer that perfect balance of soft texture and bold flavor. The apple cider adds a subtle tang and moisture that keeps the cookies incredibly tender, while the cinnamon and nutmeg bring cozy warmth to every bite. The caramel filling adds a rich, sweet creaminess that elevates these cookies beyond ordinary.
What makes these cookies stand out is not just their taste but their versatility. They’re great for lunchboxes, party platters, or a simple indulgence with your afternoon tea. Plus, they’re surprisingly simple to make, requiring just one bowl and straightforward ingredients that might already be in your pantry. If you’re a fan of Salted Caramel Cupcakes, you’ll appreciate the familiar caramel notes here, but in a new, soft cookie form. This recipe proves that some of the best desserts come from humble ingredients and a little love.
Gather These Ingredients
- 2 cups all-purpose flour – the base of your soft, chewy cookies
- 1 teaspoon baking powder – for gentle lift
- 1 teaspoon baking soda – helps with browning and texture
- 1 teaspoon ground cinnamon – adds warm, spicy notes
- 1/2 teaspoon ground nutmeg – complements the cinnamon perfectly
- 1/2 teaspoon salt – balances the sweetness
- 1/2 cup unsalted butter, softened – for richness and tenderness
- 1 cup brown sugar, packed – adds moisture and deep sweetness
- 1 large egg – binds everything together
- 1 teaspoon vanilla extract – enhances flavor complexity
- 1/2 cup apple cider – infuses the batter with fruity, tangy moisture
- 1/2 cup caramel sauce – for the luscious filling
- 1 cup powdered sugar – to sweeten and thicken the caramel filling
- 1 tablespoon milk – adjusts the filling’s consistency
Tools of the Trade
- Mixing bowls – for combining wet and dry ingredients separately
- Electric mixer or stand mixer – to cream butter and sugar effortlessly
- Measuring cups and spoons – for accuracy
- Spatula – to fold ingredients without overmixing
- Baking sheet(s) – to bake the cookies evenly
- Parchment paper or silicone baking mats – prevents sticking and easy cleanup
- Cooling rack – to cool cookies evenly without sogginess
- Small bowl and whisk – for preparing the caramel filling
Apple Cider Whoopie Pie Cookies with Caramel: How It’s Done

Step 1: Prep Your Oven and Pans
Preheat your oven to 350°F (175°C). Line two baking sheets with parchment paper or silicone mats to ensure your whoopie pie cookies don’t stick and bake evenly.
Step 2: Mix the Dry Ingredients
In a medium bowl, whisk together the all-purpose flour, baking powder, baking soda, ground cinnamon, ground nutmeg, and salt. This evenly distributes the leavening agents and spices to create a balanced flavor and texture.
Step 3: Cream Butter and Sugar
In a large bowl, use an electric mixer to cream the softened unsalted butter and brown sugar until light and fluffy, about 3-4 minutes. This process helps incorporate air for a tender crumb.
Step 4: Add Egg and Vanilla
Beat in the large egg and vanilla extract until fully combined. These ingredients add moisture and richness to the batter.
Step 5: Incorporate Dry Ingredients and Apple Cider
Add the flour mixture in three parts, alternating with the apple cider, beginning and ending with the flour. Mix gently after each addition until just combined. Overmixing can cause tough cookies, so be careful to stop once the batter is smooth and uniform.
Step 6: Scoop and Bake
Using a cookie scoop or tablespoon, drop rounded spoonfuls of batter onto the prepared baking sheets, spacing them about 2 inches apart. Bake for 10-12 minutes, or until the edges are set and the tops spring back when lightly pressed.
Step 7: Cool Completely
Allow the cookies to cool on the baking sheets for 5 minutes before transferring them to a cooling rack. Cooling completely is essential before assembling whoopie pies to prevent the filling from melting.
Step 8: Make the Caramel Filling
In a small bowl, whisk together the caramel sauce, powdered sugar, and milk until smooth and spreadable. Adjust with more milk or powdered sugar as needed to achieve a creamy but thick consistency perfect for sandwiching.
Step 9: Assemble Your Whoopie Pie Cookies
Pair cookies of similar size. Spread about a tablespoon of the caramel filling onto the flat side of one cookie, then gently sandwich with its match. Press just enough to spread the filling to the edges without squeezing it out.
Step 10: Serve and Enjoy
Your Apple Cider Whoopie Pie Cookies with Caramel are best enjoyed fresh but can be stored for later indulgence.
Healthier Substitutions

- Use whole wheat pastry flour instead of all-purpose flour for added fiber without sacrificing tenderness.
- Swap brown sugar with coconut sugar for a lower glycemic index.
- Replace butter with coconut oil or a plant-based spread for a dairy-free alternative.
- Use a homemade caramel sauce made with natural sweeteners to reduce processed sugar content.
- Substitute milk with almond milk or oat milk in the filling for a lighter option.
Easy-to-Miss Gotchas
- Butter temperature: Make sure the butter is softened, not melted, to achieve the right cookie texture.
- Measuring flour: Spoon and level the flour rather than scooping directly with the measuring cup to avoid dense cookies.
- Baking time: Don’t overbake; the cookies should be soft and springy, not hard.
- Cooling: Cool cookies completely before filling, or the caramel will melt and ooze out.
- Caramel filling consistency: Adjust the powdered sugar and milk carefully; too runny and it won’t hold, too thick and it’s hard to spread.
Make Ahead Like a Pro
You can prepare the cookie dough a day ahead and store it tightly wrapped in the refrigerator. When ready, scoop and bake as usual. The caramel filling can also be made up to two days in advance and stored in an airtight container in the fridge. Assemble the whoopie pies just before serving to keep the cookies soft and the filling fresh.
Common Qs About Apple Cider Whoopie Pie Cookies with Caramel
Can I substitute apple cider with something else?
Yes! If you don’t have apple cider on hand, you can use apple juice or a mix of water and apple cider vinegar for a similar tang and moisture. Just keep the quantity the same for the best texture.
How do I store these whoopie pie cookies?
Store the assembled cookies in an airtight container at room temperature for up to 2 days. For longer storage, refrigerate them for up to a week. Bring to room temperature before serving for the best flavor and texture.
Can I freeze Apple Cider Whoopie Pie Cookies with Caramel?
Absolutely! Freeze the baked cookies and the caramel filling separately. Thaw cookies at room temperature, then assemble with the filling. This prevents sogginess and keeps the cookies fresh.
Is there a way to make these without caramel?
Yes, you can replace the caramel filling with a simple cream cheese frosting or a spiced buttercream. If you love fruit flavors, try a lightly sweetened apple butter or cinnamon-infused frosting for a twist. For more inspiration on apple desserts, check out this Vegan Apple Pie recipe.
One Pan, More Ideas
- Salted Caramel Cupcakes – a luscious caramel treat that pairs beautifully with apple flavors.
- Vegan Apple Pie – a plant-based spin on a classic fall dessert.
- Cinnamon Rolls – warm, gooey rolls packed with spice and sweetness.
- Pumpkin Muffins – moist and flavorful muffins perfect for breakfast or snack time.
Final Bite
Baking Apple Cider Whoopie Pie Cookies with Caramel is a delightful way to bring the flavors of the season into your kitchen. These cookies balance tender spices, tangy apple cider, and rich caramel into a harmonious bite that feels both nostalgic and new. Whether you’re baking for a crowd or a quiet night in, this recipe will quickly become a go-to for sharing joy and sweetness. Happy baking!
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Apple Cider Whoopie Pie Cookies with Caramel
Ingredients
- 2 cups all-purpose flour – the base of your soft, chewy cookies
- 1 teaspoon baking powder – for gentle lift
- 1 teaspoon baking soda – helps with browning and texture
- 1 teaspoon ground cinnamon – adds warm, spicy notes
- 0.5 teaspoon ground nutmeg – complements the cinnamon perfectly
- 0.5 teaspoon salt – balances the sweetness
- 0.5 cup unsalted butter softened – for richness and tenderness
- 1 cup brown sugar packed – adds moisture and deep sweetness
- 1 large egg – binds everything together
- 1 teaspoon vanilla extract – enhances flavor complexity
- 0.5 cup apple cider – infuses the batter with fruity, tangy moisture
- 0.5 cup caramel sauce – for the luscious filling
- 1 cup powdered sugar – to sweeten and thicken the caramel filling
- 1 tablespoon milk – adjusts the filling’s consistency
Instructions
- Preheat your oven to 350°F (175°C). Line two baking sheets with parchment paper or silicone mats to ensure your whoopie pie cookies don’t stick and bake evenly.
- In a medium bowl, whisk together the all-purpose flour, baking powder, baking soda, ground cinnamon, ground nutmeg, and salt. This evenly distributes the leavening agents and spices to create a balanced flavor and texture.
- In a large bowl, use an electric mixer to cream the softened unsalted butter and brown sugar until light and fluffy, about 3-4 minutes. This process helps incorporate air for a tender crumb.
- Beat in the large egg and vanilla extract until fully combined. These ingredients add moisture and richness to the batter.
- Add the flour mixture in three parts, alternating with the apple cider, beginning and ending with the flour. Mix gently after each addition until just combined. Overmixing can cause tough cookies, so be careful to stop once the batter is smooth and uniform.
- Using a cookie scoop or tablespoon, drop rounded spoonfuls of batter onto the prepared baking sheets, spacing them about 2 inches apart. Bake for 10-12 minutes, or until the edges are set and the tops spring back when lightly pressed.
- Allow the cookies to cool on the baking sheets for 5 minutes before transferring them to a cooling rack. Cooling completely is essential before assembling whoopie pies to prevent the filling from melting.
- In a small bowl, whisk together the caramel sauce, powdered sugar, and milk until smooth and spreadable. Adjust with more milk or powdered sugar as needed to achieve a creamy but thick consistency perfect for sandwiching.
- Pair cookies of similar size. Spread about a tablespoon of the caramel filling onto the flat side of one cookie, then gently sandwich with its match. Press just enough to spread the filling to the edges without squeezing it out.
- Your Apple Cider Whoopie Pie Cookies with Caramel are best enjoyed fresh but can be stored for later indulgence.
Equipment
- Mixing bowls
- Electric mixer or stand mixer
- Measuring cups and spoons
- Spatula
- Baking Sheets
- Parchment paper or silicone baking mats
- Cooling rack
- Small bowl and whisk
Notes
- Make sure the butter is softened, not melted, to achieve the right cookie texture.
- Cool cookies completely before filling to prevent the caramel from melting and oozing out.
- Store assembled cookies in an airtight container at room temperature for up to 2 days or refrigerate for up to a week.
